BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C10SP1|AL425243
(934 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1066 1838 0.0
>3x_Contig1066
Length = 4816
Score = 1838 bits (926), Expect = 0.0
Identities = 931/934 (99%)
Strand = Plus / Minus
Query: 1 ttctagacatatcagcagtttctttcaaataccgtataaggrattcagtgtaatcaaaat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4483 ttctagacatatcagcagtttctttcaaataccgtataagggattcagtgtaatcaaaat 4424
Query: 61 tatctttgaagagcagcacaagagattgtctattttttatttcatttatgtccattgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4423 tatctttgaagagcagcacaagagattgtctattttttatttcatttatgtccattgatg 4364
Query: 121 gtgcagataaccactgagtcaaaagccgagttccggatgtggttactgttcttcgaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 gtgcagataaccactgagtcaaaagccgagttccggatgtggttactgttcttcgaattg 4304
Query: 181 tcgacaaaagtgagcctttcttgtgatgttttctcattgtagaatgtaactccaacgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 tcgacaaaagtgagcctttcttgtgatgttttctcattgtagaatgtaactccaacgctg 4244
Query: 241 tacttgttctggaatcaatttgcattatatctgtgataagttgtttctgtgggagttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4243 tacttgttctggaatcaatttgcattatatctgtgataagttgtttctgtgggagttcta 4184
Query: 301 gattagtgttgatatccggaagatgttcctcaatgtaaagcaggaggtttctgagtgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 gattagtgttgatatccggaagatgttcctcaatgtaaagcaggaggtttctgagtgccg 4124
Query: 361 caatttctttttgggtgaagtttcccaatgatcttccaatgtcaccttctgcatttgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4123 caatttctttttgggtgaagtttcccaatgatcttccaatgtcaccttctgcatttgaga 4064
Query: 421 acaatttaaagaaggattgaataggacgatgtttggaaggcatcttttgatacttgataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 acaatttaaagaaggattgaataggacgatgtttggaaggcatcttttgatacttgataa 4004
Query: 481 aatatttcttcaattctgttaattccttataccattcaccattcgtaatttcgacgggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4003 aatatttcttcaattctgttaattccttataccattcaccattcgtaatttcgacgggca 3944
Query: 541 ttatctcctcatccaaaagaacttccataggccttattctagtaattgaagacactaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 ttatctcctcatccaaaagaacttccataggccttattctagtaattgaagacactaaat 3884
Query: 601 ctttcaaatatacctgttgcacaaatatttcaccagtagatatatcacaccaagacaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 ctttcaaatatacctgttgcacaaatatttcaccagtagatatatcacaccaagacaaac 3824
Query: 661 ctactggaatgttcaaatctgcagctcttttcatacagttttcggagaagtgtacagtga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3823 ctactggaatgttcaaatctgcagctcttttcatacagttttcggagaagtgtacagtga 3764
Query: 721 gtaaatactgattttcctggaaattttcgaaagcttcatcgatgaatgttccgggtgtga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3763 gtaaatactgattttcctggaaattttcgaaagcttcatcgatgaatgttccgggtgtga 3704
Query: 781 caattctagtaactcttctcatgaacttatttttatcattatcaactaatgtttcatgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 caattctagtaactcttctcatgaacttatttttatcattatcaactaatgtttcatgtt 3644
Query: 841 tgaattggtcacatacggctacactatatccatattgtttcacaaggacctttaagtgtc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 tgaattggtcacatacggctacactatatccatattgtttcacaaggacctttaagtgtc 3584
Query: 901 tgttcaattgattcaaarggaatcctgcaaatgg 934
||||||||||||||||| | ||||||||||||||
Sbjct: 3583 tgttcaattgattcaaaggaaatcctgcaaatgg 3550
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8399
Number of Sequences: 1807
Number of extensions: 8399
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)